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    <th>MRtrix #VERSION# - table of contents</th>
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<ul class=toc>
  <li><a href='intro.html'>Introduction</a></li>
  <ul>
    <li><a href='intro.html#citing'>Acknowledging this work</a></li>
    <li><a href='intro.html#warranty'>Warranty</a></li>
    <li><a href='intro.html#license'>License</a></li>
    <li><a href='intro.html#support'>Support</a></li>
    <li><a href='intro.html#platforms'>Supported platforms</a></li>
    <li><a href='intro.html#conventions'>Conventions used in this manual</a></li>
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  <li><a href='install/index.html'>Installation</a></li>
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    <li><a href="install/unix.html">Unix/Linux</a></li>
    <li><a href="install/windows.html">Microsoft Windows</a></li>
    <li><a href="install/macosx.html">Mac Os X</a></li>
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  <li><a href='general/index.html'>General Information</a></li>
  <ul>
    <li><a href='general/overview.html'>Overview</a></li>
    <li><a href='general/cmdline.html'>Command line usage</a></li>
    <li><a href='general/formats.html'>Supported file formats and data types</a></li>
    <li><a href='general/mrview.html'>MRView</a></li>
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  <li><a href='tractography/index.html'>White matter tractography</a></li>
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    <li><a href='tractography/dwi.html'>Importing DW data</a></li>
    <li><a href='tractography/preprocess.html'>Data pre-processing</a></li>
    <li><a href='tractography/roi.html'>ROI selection</a></li>
    <li><a href='tractography/tracking.html'>Performing fibre-tracking</a></li>
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  <li><a href='faq.html'>Frequently Asked Questions</a></li>
  <li><a href='commands/index.html'>List of MRtrix commands</a></li>
  <li><a href='appendix/index.html'>Appendix</a></li>
  <ul>
    <li><a href='appendix/config.html'>The MRtrix configuration file</a></li>
    <li><a href='appendix/mrtrix.html'>The MRtrix file format</a></li>
    <li><a href='appendix/refs.html'>References</a></li>
    <li><a href='appendix/gpl-3.0.html'>The GNU General Public License</a></li>
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Donald Tournier<br>
MRtrix version #VERSION#<br>
Last updated #MTIME#
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